********** MODEL NAME OPO--Bgal ********** MODEL NOTES MMmbpHD:Users:mmossing:Documents:MATLAB:work:opobgalsimparams060713.xls 1 DNA -> DNA + mRNA k1 1.000 3 mRNA -> mRNA + bgal k2a 2.000 6 mRNA -> null k5 0.130 8 bgal -> null k7a 0.011 ********** MODEL STATES d/dt(mRNA) = R1-R6 %trx - deg d/dt(Bgal) = R2a-R8 %trlBgal - deg mRNA(0) = 0 Bgal(0) = 0 ********** MODEL PARAMETERS k1 = 1 %trx k2a = 2 %trlBgal k6 = 0.13 %deg mRNA k8 = 0.0108 %deg Bgal ********** MODEL VARIABLES ********** MODEL REACTIONS R1 = k1 %trx R2a = k2a*mRNA %trl Bgal R6 = k6*mRNA %deg R8 = k8*Bgal %deg ********** MODEL FUNCTIONS ********** MODEL EVENTS ********** MODEL MATLAB FUNCTIONS